Available BIDS Apps
All apps
Unmaintainted apps
| FibreDensityAndCrosssection |
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| niak |
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Apps sorted by input type
For BIDS raw datasets: anat data
| antsCorticalThickness |
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| baracus |
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| HCPPipelines |
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| MAGeTbrain |
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| mindboggle |
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| ndmg |
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| QAP |
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| bidspm |
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| fmriprep |
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| dmriprep |
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| mriqc |
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| nibabies |
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| nirodents |
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| BIDSonym |
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| connectomemapper3 |
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| multiscalebrainparcellator |
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For BIDS raw datasets: func data
| afni_proc |
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| CPAC |
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| DPARSF |
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| freesurfer |
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| HCPPipelines |
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| nipypelines |
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| oppni |
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| QAP |
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| bidspm |
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| funcmasker-flex |
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| fmriprep |
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| mriqc |
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| nibabies |
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| nirodents |
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| connectomemapper3 |
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For BIDS raw datasets: dwi data
| HCPPipelines |
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| MRtrix3_connectome |
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| ndmg |
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| tracula |
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| dmriprep |
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| connectomemapper3 |
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For BIDS derivative datasets: anat data
| bidspm |
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| connectomemapper3 |
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For BIDS derivative datasets: func data
| brainiak-srm |
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| hyperalignment |
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| PyMVPA |
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| rs_signal_extract |
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| rsHRF |
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| bidsMReye |
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| bidspm |
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| fitlins |
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| connectomemapper3 |
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For BIDS derivative datasets: dwi data
| MRtrix3_connectome |
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| connectomemapper3 |
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